Partially Solved My y axis is acting horribly

So along the bed travel ... that axis?

Have you check ed the belt to make sure it is tight enough?

 

It should make a low thrum noise if you pluck it like a guitar string.
A thrum, not a thud

 

Sure, loose drive gear on the motor shaft -- the one that makes the belt move. Sometimes the set screws get loose (or fall out)

If it continues with no obvious mechanical issue then it could be the electrical side (bad stepper motor or bad stepper driver or bad RAMPS)

 

If its a R1+ check the little plastic holder that keeps the bed wires tucked away. Sometimes (all the freaking time!) it comes loose and falls down and hits the middle plate stopping movement. The bed wiring itself has been known to wreak havok. I'd do like @mark tomlinson suggested and tighten the set screws then witht he glass bed lifted off the magnets move the Y back and forth and see if anything is hitting. If not set the bed back downa nd move it back and forth. if you feel restriction something is physically stopping movement

 

the shaft on the stepper motor?

 

yea that is likely not a good thing. It shouldn't fall out like that. I'd start with replacing the stepper as it may have died

 

LOL Fair enough!

 

Look on amazon if you need one, NEMA 17, at least 32 oz-in of torque and check the physical size to be close. There are a lot of options most cheap (i.e. less than $20 and some a good bit less)